YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IPI:IPI00195219....
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLPAVSSV PQTGAASGDR ELPQAEVGGE RRALPGPARP EEIREGPMAA DREGPAAPAA  60
   61 AARGGRVAAA PEGRAAEARG SPAAAARGGA AAREGLVAAA SREVRMAEMA RLLGEPLEEE 120
  121 APEGRPRSRA GGLAAMPYLR FRHPLSVLGI NYQQFLRHYL ENYPIAPGRI QELEERRRRF 180
  181 VEACRAREAA FDIEYLRNPQ RVDFDILTFT IALTASEVIN PLIEELGCDK FIHRE

Type	Start	End	Confidence
Signal Peptide	1	15	0.70
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	235	0.99