YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114671683
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSRSSAAA KLRGQKRSGA SAAPAASAAA ALAPSATRTR RSASQAGSKS QAVEKPPSEK  60
   61 PRLRRSSPRA QEEGPGEPPP PELALLPPPP PPPPTPATPT SSASNLDLGE QRERWETFQK 120
  121 RQKLTSEGAA KLLLDTFEYQ GLVKHTGGCH CGAVRFEVWA SADLHIFDCN CSICKKKQNR 180
  181 HFIVPASRFK LLKGAEHITT YTFNTHKAQH TFCKRCGVQS FYTPRSNPGG FGIAPHCLDE 240
  241 GTVRSMVTEE FNGSDWEKAM KEHKTIKNMS KE

Type	Start	End	Confidence
Signal Peptide	1	38	0.94
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	272	0.99