YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39814
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFPLLLTLI LPNFVAPKVL EPEKDDEIAI LTKLPTFEPS KYGHINIPLR KKRGIALHPL  60
   61 QWASYLWPNA EVPYDIATHY TSTEKSIILS AMEAFKNVTC VRFRPRAATD KHYLQINKYF 120
  121 NVERCFSYIG RQSSRTLFGT PEGNVETRMR LDPACLRGNG RGIVMHELMH ILGFYHEHQR 180
  181 DDRDRRIVGS AVHYNFKIYR RAKTLYMGAY DANSIMHYNF QNLPWQRRDH FSTSDIININ 240
  241 TFYKCKNLLS SKLAPKVPIS PTSTSTTAIT TTNTTTTKL

Type	Start	End	Confidence
Signal Peptide	1	17	0.86
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	279	0.99