YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	glct-6
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTMNKLRKY GIYVLFCMLL FAMVFQFSAD LRQPSYPVFK LSEGNMTNRM IIVVTPTYKR  60
   61 MTRIPDMLRM ANTLSHIKDL HWIIVEDGNK TVPAVRDILE RTKLPYTYMG HKTILGYPRR 120
  121 GWYQRTMALK YIRSNTSQIL GKDHEEGVVY FGDDDNSYDT RLFTEYIRNV KTLGIWAVGL 180
  181 VGGTVVEAPK VVGGKVTAFN VKWNPKRRFA VDMAGFAVNL KVVLNSDAVF GTACKRGGGA 240
  241 PETCLLEDMG LEREDIEPFG YEKDKDREIL VWHTKTSTPN IVKSNKNSTK KAPPPDTFGY 300
  301 FVEA

Type	Start	End	Confidence
Cytoplasmic	1	9	0.71
Transmembrane Helix	10	29	0.71
Non-Cytoplasmic	30	304	0.98