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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE39713
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNRHALLGA LPPIFLLLLP LISCMKFDPE RIAARLRIDE KWDQLDAFQS IKSRRGRQIQ  60
   61 PKEISIQVTA PLFSSRLFDY GTTAGDEELP QALDVGKKLD LVHPISFFGS DYKTIYILSN 120
  121 GAVGFEASSR SYKSGILPSS TRFLAPFWNR NDLRNGGKVY YREVTKGRVL ERGQSEIRYQ 180
  181 YDKNVKVKSA LIITWDKMQP LNTAALPEEN TNTFQAAIFI TANGTFANFI YSNIGWTQGA 240
  241 EAGFNAGDAT NHFKLPTSGT PNIMYLEEYG NTGIPGEWMF ELSELRVISC KSGIKGDTCD 300
  301 QECSNGEWGP DCAYCCHCSE GTCHPISGDC QRGCATCWDG VACQTRQEKC ATKTQCASNA 360
  361 LSFNDYDRCG EPIQRCQCLN GYKGDGYNNC EDVDECKTNS TICHKNAICT NTPGRYFCMC 420
  421 KEGFSGDGQN DCSQSFLFQY DTHHQLPRKK NSKMEWNLKK PLKIFGETTE KLTVTSTGLI 480
  481 AINEVNRDNG RLEDMQLVGI APFFGPIDLS RNGAKGNTFQ ALLIDGSNSK NEKMTFVELM 540
  541 YRDLPWASGA EAGILSSDAS SSILLPASGT EAISQLSKNS NIKQPGTWLY RIDKAQLMPC 600
  601 AQPIQVPPYC DRLLSTAPRL PSKLLEEKKE GLTLPSPGAF LVDQPSETIV PTLVRGGGTV 660
  661 TRGRNVLTVT TSPIGNQQRQ QTTKAVTRPR PNFSSTPHRP IVSLSDEDFE LGPDAFEVTF 720
  721 PPFVTVQPEL FRPNQRNGVQ KSTQRPLPDF SIRTPLKEEA TTSVPREKTS SAAPAHSPIE 780
  781 EMSENEESPF EAGSFDGEAV KFNEELEAID KALQTTKKQR PELSVTPQPE DLSGDARVIE 840
  841 TTEEDEEEAE ISTETTTEMS STTTTTKAHT TTTTMMIPTE APPSIFVFTT TQKPRAQSTT 900
  901 QKRIIVQQPS IVVNSQPPKQ RNDNQPTVNV GHAEEQSPRL AILLPVMIIL AWLVILVCIG 960
  961 AVVCCKRRNS RESSQLRAMY GAAYGVRPTA YESKRKESTY EDHLERAARL SGQPALSGQQ1020
 1021 KTTSESTLIE CVRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle