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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|112180560
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRASASSGLV VARPTSAVPA EPRPFRPSPP HLAAMRLRRL ALFPGVALLL AAARLAAASD  60
   61 VLELTDDNFE SRISDTGSAG LMLVEFFAPW CGHCKRLAPE YEAAATRLKG IVPLAKVDCT 120
  121 ANTNTCNKYG VSGYPTLKIF RDGEEAGAYD GPRTADGIVS HLKKQAGPAS VPLRTEEEFK 180
  181 KFISDKDASI VGFFDDSFSE AHSEFLKAAS NLRDNYRFAH TNVESLVNEY DDNGEGIILF 240
  241 RPSHLTNKFE DKTVAYTEQK MTSGKIKKFI QENIFGICPH MTEDNKDLIQ GKDLLIAYYD 300
  301 VDYEKNAKGS NYWRNRVMMV AKKFLDAGHK LNFAVASRKT FSHELSDFGL ESTAGEIPVV 360
  361 AIRTAKGEKF VMQEEFSRDG KALERFLQDY FDGNLKRYLK SEPIPESNDG PVKVVVAENF 420
  421 DEIVNNENKD VLIEFYAPWC GHCKNLEPKY KELGEKLSKD PNIVIAKMDA TANDVPSPYE 480
  481 VRGFPTIYFS PANKKLNPKK YEGGRELSDF ISYLQREATN PPVIQEEKPK KKKKAQEDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle