YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110637852, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMNLRSLFY ISLAACSVII FSCEEKKPLE AGSFNYSIQG KVLNTTSEYA CLEEIRDKRW  60
   61 VTVDSAKIDD QSISFSGIKK EVDIYRIRID KNSYLPVILT GDNITFTVDA KEPFETVVFS 120
  121 GSKDNEAYAA FNKKMLEFNK AQSNLSRMLD SIKNTSTPSV IATNYMNQIK EVEAEMKVYV 180
  181 RESITKHTAS PIVFSMLSYA DWENDFPFIE TATTTIKQQQ PDYKYTASLV TNVTQYKAYL 240
  241 EQKAAKDKGN PAAIGKEAPE FALPDVTGKM VRLSSFRGKY VLLDFWASWC GPCRQESPNV 300
  301 VRAYNTYKGK NFDILSVSLD DSKEKWLKAI EKDGLSWTHV GDLKSWQSSV VQLYQVEGIP 360
  361 ATFLLDPKGV VIARDLRGDA LDAKLEELLK

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	390	0.99