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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187469171, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGPHTLLLI LAGLLFLGSA LSEECTKYKV SNCRDCIQSG PGCSWCQKLN FTGPGEPDSL  60
   61 RCDTRAQLLL KGCPADDIMD PKSFADLHPQ YQVQRSQLSP QKVTLNLRPG QAAAFNVTFR 120
  121 RAKGYPIDLY YLMDLSYSML DDLNNVKKLG GDLLQALNEI TESGRIGFGS FVDKTVLPFV 180
  181 NTHPEKLRNP CPNKEKACQP PFAFRHVLKL TDNSNQFQTE VGKQLISGNL DAPEGGLDAI 240
  241 MQVAACPEEI GWRNVTRLLV FATDDGFHFA GDGKLGAILT PNDGRCHLED NMYKRSNEFD 300
  301 YPSVGQLAHK LSESNIQPIF AVTKKMVKTY EKLTEIIPKS AVGELSDDSS NVVQLIKKAY 360
  361 YKLSSRVFLD HTTIPDTLKV TYDSFCNNRV SSIGKSRGDC DGVQINNPVT FQVKVTASEC 420
  421 IQEQSFVIRA LGFTDTVTVQ VHPQCECQCR DQSRMRNLCG GKGVMECGIC RCESGYIGKN 480
  481 CECQTQGRSS QELEGNCRKD NSSIVCSGLG DCICGQCVCH TSDIPNKVIF GQYCECDNFN 540
  541 CERYDGQVCG GLKRGSCSCG QCNCKEGFEG SACQCQRSTT GCLNARLVEC SGRGRCQCNR 600
  601 CICEKGYQPP LCEECPGCPL PCSTYVFCAE CLKFDKGPFQ KNCSVQCANV TLQTVPFKKK 660
  661 PCKERDSEGC WITYTLQQKD GNAYNIHVDD DRECVKGPNV AAIIGGTVAG VVLIGVLLLV 720
  721 IWKALTHLTD LNEYRRFEKE KLKSQWNNDN PLFKSATTTV MNPKFAES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle