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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109489580, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPLLHTRL SSDVAATGSA TLSASRTGLS NMLALESDFF SSPPRKTVRF GGTVTDVLLK  60
   61 YKKGETNDLE LLKNQLSDPD IKDDQIINWL LEFRSSVMYL TKDFEQLINI ILRLPWLNRS 120
  121 QTVVEEYLAF LGNLVSAQTV FLRPCLSMIA SHFVPPRVIV KEGGIDVSES EDEDDNLPAN 180
  181 FDTCHKALQI ITRYVPSTPW FLMPILVEKF PFVRKSERTL ECYVHNLLRI SLYFPTLRRE 240
  241 ILELIIEKSL KLDVSVSRQD IDDAEETAAQ TYGGTDAAEG LFNMDEDEET DPEKKAEQER 300
  301 PGRMAHPTAE RLDILLSLLL SYIDDVCHVQ GKIDNNKTKD LYRDLISIFD KLVLPTHASC 360
  361 HVQFFMFFLC SFKLGFAEAF LEHLWKKLQD PNNPVIIRQA AANYIGSFLA RAKFIPLITV 420
  421 KSCLDLLVNW LHLYLNSQDS GTKAFCDVAL HGPFYSACQA VFYTVVFRHK QLLSGNLKEG 480
  481 LRYLQSLNFE RIVLSQLNPL KICLPRVVNF FAAITNKYQL VFCYTIMERN NRQMLPVIRS 540
  541 TAGGDSVQTC TNPLDTFFPF DPCMLKRSKK FIDPVYQAWE DMSDEELQEL RKPTRKELVE 600
  601 DEDDDFLKGE VPQSDTVAGL TPNSFDTHFR SPSSSVGSPP VLFMPDQSSL LSRICD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle