YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149036506, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARASSRNSS EEAWGALQAP QQQLRELCPG VNTQPYLCES GHCCGETGCC TYYYELWWFW  60
   61 LLWTVLILFS CCCAFRHRRA KLRLQQQQRQ REINLLAYHG ACHGAGPVPT GSLLDLRLLS 120
  121 AFKPPAYEDV VHHPGTPPPP YTMAPGHPLT TSNECTRCSS ESSCSAQSEG TSVEGVSSNQ 180
  181 SALPPQEGEP RAGVSPVHTP PSCRYRHLTG DSGIELCPCP DSSEGELVKE LRASATQPDL 240
  241 EDHSPCALPP EPMSQVPPVG LASSYGDIP

Type	Start	End	Confidence
Non-Cytoplasmic	1	55	0.90
Transmembrane Helix	56	77	0.88
Cytoplasmic	78	269	0.55