YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90075362
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASARLLRA VIMGAPGSGK GTVSSRITTH FQLKHLSSGD LLRDNMLRGT EIGVLAKAFI  60
   61 DQGKLIPDDV MTRLALHELK NLTQYSWLLD GFPRTLAQAE ALDRAYQIDT VINLNVPFEV 120
  121 IKQRLTARWI HPASGRVYNI EFNPPKTVGI DDLTGEPLIQ REDDKPETVI KRLKAYEDQT 180
  181 KPVLEYYQKK GVLETFSGTE TNKIWPYVYA FLQTKVPQTS QKASVTP

Type	Start	End	Confidence
Signal Peptide	1	19	0.52
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	227	0.99