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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119589290, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.57
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAEPAHFYL FGLICLCSGS RLRQEDFPPR IVEHPSDLIV SKGEPATLNC KAEGRPTPTI  60
   61 EWYKGGERVE TDKDDPRSHR MLLPSGSLFF LRIVHGRKSR PDEGVYVCVA RNYLGEAVSH 120
  121 NASLEVAILR DDFRQNPSDV MVAVGEPAVM ECQPPRGHPE PTISWKKDGS PLDDKDERIT 180
  181 IRGGKLMITY TRKSDAGKYV CVGTNMVGER ESEVAELTVL ERPSFVKRPS NLAVTVDDSA 240
  241 EFKCEARGDP VPTVRWRKDD GELPKSRYEI RDDHTLKIRK VTAGDMGSYT CVAENMVGKA 300
  301 EASATLTVQE PPHFVVKPRD QVVALGRTVT FQCEATGNPQ PAIFWRREGS QNLLFSYQPP 360
  361 QSSSRFSVSQ TGDLTITNVQ RSDVGYYICQ TLNVAGSIIT KAYLEVTDVI ADRPPPVIRQ 420
  421 GPVNQTVAVD GTFVLSCVAT GSPVPTILWR KDGVLVSTQD SRIKQLENGV LQIRYAKLGD 480
  481 TGRYTCIAST PSGEATWSAY IEVQEFGVPV QPPRPTDPNL IPSAPSKPEV TDVSRNTVTL 540
  541 SWQPNLNSGA TPTSYIIEAF SHASGSSWQT VAENVKTETS AIKGLKPNAI YLFLVRAANA 600
  601 YGISDPSQIS DPVKTQDVLP TSQGVDHKQV QRELGNAVLH LHNPTVLSSS SIEVHWTVDQ 660
  661 QSQYIQGYKI LYRPSGANHG ESDWLVFEVR TPAKNSVVIP DLRKGVNYEI KARPFFNEFQ 720
  721 GADSEIKFAK TLEEAPSAPP QGVTVSKNDG NGTAILVSWQ PPPEDTQNGM VQEYKVWCLG 780
  781 NETRYHINKT VDGSTFSVVI PFLVPGIRYS VEVAASTGAG SGVKSEPQFI QLDAHGNPVS 840
  841 PEDQVSLAQQ ISDVVKQPAF IAGIGAACWI ILMVFSIWLY RHRKKRNGLT STYAGIRKVP 900
  901 SFTFTPTVTY QRGGEAVSSG GRPGLLNISE PAAQPWLADT WPNTGNNHND CSISCCTAGN 960
  961 GNSDSNLTTY SRPADCIANY NNQLDNKQTN LMLPESTVYG DVDLSNKINE MKTFNSPNLK1020
 1021 DGRFVNPSGQ PTPYATTQLI QSNLSNNMNN GSGDSGEKHW KPLGQQKQEV APVQYNIVEQ1080
 1081 NKLNKDYRAN DTVPPTIPYN QSYDQNTGGS YNSSDRGSST SGSQGHKKGA RTPKVPKQGG1140
 1141 MNWADLLPPP PAHPPPHSNS EEYNISVDES YDQEMPCPVP PARMYLQQDE LEEEEDERGP1200
 1201 TPPVRGAASS PAAVSYSHQS TATLTPSPQE ELQPMLQDCP EETGHMQHQP DRRRQPVSPP1260
 1261 PPPRPISPPH TYGYISGPLV SDMDTDAPEE EEDEADMEVA KMQTRRLLLR GLEQTPASSV1320
 1321 GDLESSVTGS MINGWGSASE EDNISSGRSS VSSSDGSFFT DADFAQAVAA AAEYAGLKVA1380
 1381 RRQMQDAAGR RHFHASQCPR PTSPVSTDSN MSAAVMQKTR PAKKLKHQPG HLRRETYTDD1440
 1441 LPPPPVPPPA IKSPTAQSKT QLEVRPVVVP KLPSMDARTD RSSDRKGSSY KGREVLDGRQ1500
 1501 VVDMRTNPGD PREAQEQQND GKGRGNKAAK RDLPPAKTHL IQEDILPYCR PTFPTSNNPR1560
 1561 DPSSSSSMSS RGSGSRQREQ ANVGRRNIAE MQVLGGYERG EDNNEELEET ES

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