YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145327707, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRNSINIHH VTSFSSSPFW CVFFLVLLCK TSTNALVKQP PNETTPAIIV FGDSIVDAGN  60
   61 NDDIMTTLAR CNYPPYGIDF DGGIPTGRFC NGKVATDFIA GKFGIKPSIP AYRNPNLKPE 120
  121 DLLTGVTFAS GGAGYVPFTT QLSGGIALSQ QLKLFEEYVE KMKKMVGEER TKLIIKNSLF 180
  181 MVICGSNDIT NTYFGLPSVQ QQYDVASFTT LMADNARSFA QKLHEYGARR IQVFGAPPVG 240
  241 CVPSQRTLAG GPTRNCVVRF NDATKLYNVK LAANLGSLSR TLGDKTIIYV DIYDSLLDII 300
  301 LDPRQYGFKV VDKGCCGTGL IEVALLCNNF AADVCPNRDE YVFWDSFHPT EKTYRIMATK 360
  361 YFERYV

Type	Start	End	Confidence
Signal Peptide	1	35	0.96
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	366	0.99