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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91785611, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSANSLIN PDARMGLAGA QPGAGAAGAG QAGGADLGGL SGGLGGNFGQ RLSGLAQMRG  60
   61 NPRAPLIFAV ALLVAVVAGL FLWSRAPDYK VLYSNLSDRD GGAIITALQA ANIPYKFSDA 120
  121 GGAILVPAEQ VHEMRLRLAS QGLPKSGSVG FELMDNQKFG ISQFAEQINY QRALEGELER 180
  181 TVESISSVKS ARVHLAIPKP SVFVRDKEAP SASVLVNLYP GRALDEGQVL AITHMVSSAV 240
  241 PDMPVKGVTI LDQDGNLLTQ PSTGSGLDAS QLKYRQQIER STQQRIDAIL APLFGSGNAH 300
  301 SQVSADIDFS RSEQTSENYG PNGNPQQAAI RSQQSSSATE MSQGGASGVP GALSNQPPQP 360
  361 ASAPINAPTG ASGVTTTPVS DRKDSTTNYE LDKTVRHLER PMGGIKRLSV AVVVNYLRVV 420
  421 DAKGHATMQP VTADKLAQVN QLVKDAMGFD AARGDSVNVV NSPFTTDLDP NADLPWWRTP 480
  481 DMIALARQVA TYLGIGAVAL FLYFVMVKPA LRRAFPPPEP VVAGALPSPD EPILLDGIPA 540
  541 AERAGAGGSS VAELESDSEL LALENSKHKY ERNLEFARNI ARQDPKIVAT VVKNWVSDER 600
  601 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle