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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91685732, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVNFPPDV AMRRALERVR LCLLAWCLIA AAQTATAAQL FDNRSNSQVV AAFPAKLTVG  60
   61 VLAGGWLPLD ALQDGRLTGM SVDYLRALVG PNVVIEAKAF PDVSQLLAAA CAGNVDLLTS 120
  121 VARTPERERC LSFTAPYFRS SSSAVVRRDG DSYASPALIA GARIAVEKGF ALERVARERF 180
  181 PHAQISAFAT THAALSAVVR GDADVYLGFT PAVQYALATE EFRGLHVAFE ESSRTANLRF 240
  241 AVPRSHAALR DQLDEALASM NPADEAAIRV RWLSGNFDAK PVPTAPRLVL TPQEQAWLRS 300
  301 LPPLQIGFDN GWSPFSYVDS SGRPAGIAAD YLAYLSRTLG VVFNRARTAD WPTAIESFQR 360
  361 GELAILATAS IHDPRLKGAR HTVAYESYPL VIVGREDEPA ARSLSDFASR RVVVSSHVAG 420
  421 SIPLAFERIP ADHVVIAPSL DDALDMVAAG EADVLVGNVA AIDILLKQRY DSVLKILGTV 480
  481 GESDALDFAV RTDLSPLAGL IDRALLAMPP AEKQRIRQKW VTGNSPESGL WSVTAVRLLP 540
  541 LLIGIGVALL ITLRAYLLLQ REVRLRKKTE LELELQLNFQ ETMMKMVPYP LVAIDLDGRY 600
  601 IAVNEAYEQA CGMSREAVIG RNTVDVQTWG EANSRILTDM TREMLNGRET AQLELQFERG 660
  661 AGNVRHGLFW ASVCRDGDGQ PACVLGTVVD ITDIRRAEMR ARETERRLFD VTRSLPAVVF 720
  721 QLRRTSDGAY SFPYIGGDTR HLLGGKDGSL NRSDHVDFQR VCEEDRAFVL AELERSALCE 780
  781 TPVNMEFRFE GDEEIKWARA ELVPRREADD SVVWSGYWVD ASVEHARSDE LARARDLAEA 840
  841 AARAKDDFFA MMSHEIRTPM NGVLGLVEVL ERTPLNTDQG EMLGMIHESA GALLQILDDL 900
  901 LDYSKIEAGR LTIEAESIDI RELVDNAVGL LAGRAHEKGL KVRVDIAPDV AATLRGDSVR 960
  961 LRQILFNLLG NAIKFTPQGE VDVRVSVFAQ ADGVQTLEMT VEDTGIGIAP EVQNRLFEPF1020
 1021 VQAESSTTRR FGGTGLGLTI CRKLIDLMGG SLALHSEPGS GTRMTVRLDM AVETQRYSVN1080
 1081 GLRGKRGLVA TGDARVAQAL MHFGEALGLT LRRVPPDAPE LRDRVALANL DLLFVNEDVT1140
 1141 LPADVRPRTR VICLTEKPKP TGYRILDDNV RLSINPISWR GLGAACAAAM TGLPSVPRSA1200
 1201 GTPRAPEGGP PPPDRERAIA SGRLILVAED HPVNQELIRH QLALLGFACD VTNDGAEALA1260
 1261 ALQRTSYGCL ITDCHMPNVS GYELTRRIRE GEEGGAHRLP ILGITANTAP EDLNLCRDAG1320
 1321 MDDSLVKPTR LATLRDYLSR WFGSDSAAHA APSESVGAPA IAATDVQGGA DPFVPVDLGH1380
 1381 MTQLWGSEST VKALLDSFVS SVREDVQSLS PLLERVGSER TELERVREWL HRVAGAASVL1440
 1441 QYPPLLMALE DYRREINVKP PERVRNDGMV LIDKCNAMLD GIEQQAALLV 

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