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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89949849, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLQRLMTLC SVLALTGLAG CNNDKTSQTD HTSAQTTAPG APGAAPTWAY SGKTGIGTSY  60
   61 EQYVEGRYQA SAPTGNVSKV WFSVTQGILT ETMYGLIHEA QLKDMQFFIQ GPDFLHSERD 120
  121 DTEHHIEYLH TDAKGNPLSL AYKLVNKDKQ GRYQIEKHIA TNPDNQSVVM KVIFTSNIDG 180
  181 ITPHLVANPH IANTGINDKG WVEDNTLYAS DGNSAMAIAL KGSPIIGSAG FVGTSDLPTD 240
  241 LADGKVDWQY SSTGETTGNV SLAASLPEMA KGSAEWEIAL GFGDSAANAN KAAQASLQAG 300
  301 FAKVLTNYNG EGDAVGWEDY LASLPNLPAM AAQATDGGKL AYTSAMVLKA QEDKSHAGAL 360
  361 IASLSNPWGD IVPAVESSTG YKAVWPRDFY QVAMAFLALG DNETPKVAFE YLKKVQAGPD 420
  421 IEGYEGAPGW FLQKTHVDGT LEWYAVQLDQ TAMPIMLGWR LWQAGILSDA EAKHWYTVML 480
  481 KPAAEFLADG GEISLGWNKR TITPPYTQQE RWEEQEGHSP STTAAVIAGL VTAAEFAKFA 540
  541 GDSEGTTKYL AKADEYRSKL IPRTYTTQGN LNKAPSNGKY FLRVNLNEDP NDQGKLLERN 600
  601 GQIALNESDI IDPGFLELVR YGVTEATDEH ITESLVEIDD PALPDFLKVK YTVNVNGKQA 660
  661 VGWRRYGGDG YGETTSTGEG YGHGGTMHPD QRGRIWPFFT GERGHYELAL AKADNGVSDA 720
  721 ELTNLRNIYV NSMETFANEG LMLPEQVWDG VGDNSAYNYP IGTGTNSATP LAWTHAEYLK 780
  781 LLRSLADKEV WDHYTPVAKR YKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle