YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215254162, gi...
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKIMASSYII IFALALFVEL TTRSMALPKF KMDEEHTDQE RMVSVAGEDD ISELGPGQLP  60
   61 FRRHPIIEGR LVDEDGTKRI FILADTGIKG GREGNLAFSR TFSELLPHGL EHALDGFSTM 120
  121 DEQRNVEDVI PVGRRDIDML RCMVGRVYRP CWQA

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.67
Transmembrane Helix	8	27	0.62
Cytoplasmic	28	154	0.49