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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108770433, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTLAYIPS PPQGVWELGP FPLRAYALCI IAGIIVALVL GDRRWEARGG ERGVIYDIAL  60
   61 WAVPFGLIGG RLYHVITDWQ TYFGPDGAGL IAAFRIWEGG LGIWGAVALG GVGAWIACRR 120
  121 RGIPLPAFGD AIAPGIILAQ AIGRLGNYFN QELYGRATTV PWGLEIYERV DASGARNDLI 180
  181 GVSTGRVIEI VHPTFLYELV WNLLVFAVLI WADRRFNLGH GRLFALYVAG YCLGRFWIEL 240
  241 LRSDMATELA GIRVNSFTSM FVFIGAVVYL MAAPRGREDP ATLRSDVDEE VEAAAVSPND 300
  301 FEADAVEPGD TDEDDAATTA LLKEAAAATG VGVAAKVAGD DDAKDEDVQS DTAEPVAEAE 360
  361 ALAEDVESAP SEDIAEAVAF ADAGEAADRE PLTTAGVVEG EDAVAAEESA EEAHAAAVEG 420
  421 AEEAEAVAEE VAAEDRAQET PAEAPSVKPS RFLGRLFARA SRSVKPEPAE AGKAADREPL 480
  481 TTAGAADGGP DEEMPEPVAE AEALAEDVES APSEDIAEAV AFAEAGEAAD EEPPVTVGSV 540
  541 EGEDAVAAEE SAEEAHAAAV EGAAEAEALA DEVAVADAGE PESQPEPVPE VEAGEAADRE 600
  601 ALTTARVVEG EDAVAAEESA EEAHEAAVEG AAEAEALADE VAVADAGEPE PEGEPESVAE 660
  661 PEAVADEVAD DTAEPVAGVE AGEAGDREPL TTAGAVEGGA EAEALADEVA GDMAEPVAEV 720
  721 GAGEAADREA LTTAGAVEGE DAVAAEESAE EAHEAAVEGA AEAEALADEV AAAEPEALAE 780
  781 DVESAPSEDI AETAAFADAG EAADREPLTT AGAVEGAEEA EAVAEGGLDE DLEAAVERAD 840
  841 EAEAVAEEIA VADAEGQFAD DEPVEDRDAE AVAGEVGAAE AEALEDSAVE QETAPDETAE 900
  901 PVVDDEELAA SAQDAPGDDV ADIDEGGETD ASAYRIITTP EPVPTRRRWF RRRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle