YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92909278, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQPTRKRSG LGRGLASLIP TGPTEDGSQA ALGGPRMGNA AADVVIGGGP VAAPPAPELG  60
   61 AVYREIDPSA IEPNPRQPRQ VFDGEALAEL VHSIREFGLM QPIVVRALEP GDAGPRYQLV 120
  121 MGERRWRAAQ EAGLATIPAI VRETADDSML RDALLENIHR VQLNPLEEAA AYQQLLDEFG 180
  181 VTHDELAARI GRSRPVITNM IRLLRLPIAV QRRVAAGVLS AGHARALLAL EGGPERQEEL 240
  241 AARIVAEGLS VRATEEAVTL ANHSGPAAPP APRRKPIQMP GLQDVAEQLS TAFDTRVTVS 300
  301 LGKRKGKIVV EFGSVDDLQR IVELMNSTKP

Type	Start	End	Confidence
Signal Peptide	1	30	0.78
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	330	0.99