YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|126236983, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPESKRPDPK RRSPASRPGK PGGANRGRPK GTSTPRREPR AIEAKPASEQ PYAESVGHAI  60
   61 VRRAEQLAVE QSEQRFGSAA RRAAILAAVV CVLTLTIAGP VRTYFSQRTE MKQLKATEEQ 120
  121 LREQIAELEQ QKVKLADPVF IAAQARERLG FVMPGDIPFQ VQLPPGAVAP GSRPADEQPN 180
  181 APSGQPWYTS LWKTIADEPH GAPAPPPVPP GPPPLPAPPP PPGG

Type	Start	End	Confidence
Cytoplasmic	1	82	0.85
Transmembrane Helix	83	104	0.85
Non-Cytoplasmic	105	224	0.91