YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92438565, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCSPTWCCG WPPVWNAAPA AWALTCAKRR SERCGSSVER LLERRGHPGI VGDRAWPSRR  60
   61 MRRGDNQTAC PHAGQIRMST TQRNCFEVCA CDTPGRGGRD RAVTAVQRLE QHRQSSTEQH 120
  121 RRRSINGRNT ESRYMPTINQ LVRKGRRDKI AKVKTAALKG SPQRRGVCTR VYTTTPKKPN 180
  181 SALRKVARVK LTSQVEVTAY IPGEGHNLQE HSMVLVRGGR VKDLPGVRYK IIRGSLDTQG 240
  241 VKNRKQARSR YGAKKEKS

Type	Start	End	Confidence
Signal Peptide	1	23	0.67
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	258	0.99