YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|255649270
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYDEDEKEE NNERWLLTYS DLITLLMIFF VIMYSMSNVD AEKYKQLSQS LNSAFGGSSG  60
   61 VIEGGNSKIE PVVEPGSNDL DSLQNAKFKK VGEEIQKYLN ENGMANSVSL RVQDRGLVIS 120
  121 LKDTILFDTG KAVVKDNSRD KIIQIGKMLN EMNSYMRVEG HTDNMSIKNS EFKSNWDLSV 180
  181 MRATNVVQLL IDNAGIAPDK LSAVGYGEFR PIAENSSEEG RSKNRRVDIV LVDSKYDNVE 240
  241 NVSKDK

Type	Start	End	Confidence
Cytoplasmic	1	15	0.66
Transmembrane Helix	16	36	0.76
Non-Cytoplasmic	37	246	0.84