YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|255091154
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKDITIGQY YPTSSAIHKL DPRIKLVATI VFMVSIFVVN KFWPYIVVLL CLLAMIKLAN  60
   61 IPVKYIVKGV KPLKWIILFT FLINIFFLPG DEIWSFGFLA ITKQGLRQAI FMAIRLIFLV 120
  121 VGTSLLTLTT SPIELTDGIE RLLNPFKKIG LPVHELAMMM TIALRFIPTL LDETDKIMKA 180
  181 QMSRGADFES KNLINRAKNL VPLLVPLFVS AFRRADELAM AMEARCYRGG HNRTKMRESV 240
  241 ISRRDYMACV FQVVYLGAII ATRFIAI

Type	Start	End	Confidence
Cytoplasmic	1	20	0.73
Transmembrane Helix	21	39	0.56
Non-Cytoplasmic	40	41	0.55
Transmembrane Helix	42	61	0.81
Cytoplasmic	62	72	0.54
Transmembrane Helix	73	94	0.83
Non-Cytoplasmic	95	108	0.59
Transmembrane Helix	109	131	0.87
Cytoplasmic	132	245	0.80
Transmembrane Helix	246	266	0.83
Non-Cytoplasmic	267	267	0.90