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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|914873
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTSKMIDSSL EFDTALIDKA ENLGRFLLSS EDIEGLKFML LNIGFRIIDD SIISTSKEIL  60
   61 DTTDNINSAG NKSIRSAKSF NDLQHTLSLS KQKNILPSAV QSNEKYVSIS ILDTVGNEGS 120
  121 PLLLTDDNIN QHPNMIVSST AEDTCIVMCH VGGLRNHVVT NDLLLRDVKN ILSAMRSGND 180
  181 TKNISALINS LDPSPISKIA LEWIQSHRLK TIEPKLDFKR TRFISADNGD IYLIALDESI 240
  241 TIGNVSTLPF PILEIKKLSR SSGLSQTAIN EDNKFKQLMK SVVTNEFQCS LIPPDLTTWK 300
  301 ICLELVHSNE LQNDLFQLLL RDQYKLNSDD SLSPDEFFQL GKDRLEEEFD LTGPINNSQG 360
  361 SVDSGRRVRI HKKSKQSDNE TKKKPIRYWN EFDEQEEDNL DNAFYIDTNG SRSTTDNEES 420
  421 LLLRNSPPDY GFILFSRNFI NRTYDFCEKL RNLIRHDKKT SPDLFQNSKH PHCSSTNYGS 480
  481 VASFGSQSTS ASYDDVQRYL QYQQQDIEDS QSIYEYRHDE VVTFLYLSAL LTSCIMASVC 540
  541 LGIVLSLFRG QSNNEIDLEI QNILIAIIII SLLVSLILIC ACLLLLFSRF TLAPIWHYVG 600
  601 CFTMFFSVTG TVCYGMIEIF F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle