YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2196469
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEEKKELKK RRVLQMARFY GAAAFTLITM RLISRAIKVR KCVPSIFQQN YKLPPFSQRN  60
   61 EAMSALTYAS AASIGTFSTL IFGFCWALDI STAREFVFKT REFMSLPQAL ETDTSMDEET 120
  121 SKLTKQLQDL LSSENNK

Type	Start	End	Confidence
Cytoplasmic	1	15	0.94
Transmembrane Helix	16	37	0.83
Non-Cytoplasmic	38	64	0.93
Transmembrane Helix	65	88	0.86
Cytoplasmic	89	137	0.91