YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NYV1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVSYVEVI KNGETISSCF QPFQKNENYG TITSANEQIT PVIFHNLIMD MVLPKVVPIK  60
   61 GNKVTKMSMN LIDGFDCFYS TDDHDPKTVY VCFTLVDMPK ILPIRILSGL QEYESNATNE 120
  121 LLSSHVGQIL DSFHEELVEY RNQTLNSSGN GQSSNGNGQN TISDIGDATE DQIKDVIQIM 180
  181 NDNIDKFLER QERVSLLVDK TSQLNSSSNK FRRKAVNIKE IMWWQKVKNI TLLTFTIILF 240
  241 VSAAFMFFYL W

Type	Start	End	Confidence
Cytoplasmic	1	228	0.97
Transmembrane Helix	229	250	0.92
Non-Cytoplasmic	251	251	0.97