YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1730784, gi\|8...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTKHTTSH HMELIRIIIL RLLFILIMLI FRNSVSFKMT FQELLPRFYK KNSNSVSNNN  60
   61 RPSSIFSENL VDFDDVNMVD KTRLFIFLFF SFIITIPFMV

Type	Start	End	Confidence
Cytoplasmic	1	16	0.75
Transmembrane Helix	17	35	0.91
Non-Cytoplasmic	36	81	0.80
Transmembrane Helix	82	99	0.75
Cytoplasmic	100	100	0.70