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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|255517508
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNKVVESY KITGMTCAAC AKAVERVTKK MDGVYDQSVN IATEKLKIEY DNSKVNFDDI  60
   61 KQVVEKAGYG IIKEESNKKI DMKIDGMTCA ACAKAVERVV KKLDGVESIS VNIATDKANI 120
  121 DYDPSKVKLS QIKAAIEKAG YKPIEEVRNK VDVDEDKLRK EREMKSLFVK FIVAIVFAVP 180
  181 LFYIAMGPMI IKPIGPWPLP EIINPMTNTF NYALIQLILV IPVMIAGYKF YINGFKSLFS 240
  241 LSPNMDSLVA IGTLAAFLYS LYTTLQIANG QIQGMHHHQL YYESAGIIIA LILLGKYLES 300
  301 KSKGKTSEAI KKLMGLQPKT AIVLVDGKEV ETPIEEVEIG DILLVKPGTK IPVDGVVIEG 360
  361 YTSVDESMLT GESIPVEKNV GSKVTGASIN KNGVIKFKAE KIGGDTALAQ IIKLVEDAQG 420
  421 TKAPIAKLAD TVSGYFVPIV IAIAVVASLL WFLIGGKDIV FVLTIFISVL VIACPCALGL 480
  481 ATPTAIMVGT GKGAENGILI KGGEALESAH KVNTVIFDKT GTITEGKPKV TDIVLNNNVK 540
  541 EEYLIKIASS AEKGSEHPLG EAIVKYGEEK NIKFEKVDNF KAIPGAGIQV TINDESILLG 600
  601 NRKLMNDNNI KLGDLEEKSN VLASQGKTPM YIAVDGNLSG IIAVADVVKE SSKKAIEILH 660
  661 DMGIKVAMVT GDNAKTANAI ANQVGIDMVL AEVLPEDKSK EVEKLQNQGK FVAMVGDGIN 720
  721 DAPALAKADI GIAIGSGTDV AIESADIVLM KSDLIDVPTA IKLSHETIKN IKQNLFWAFG 780
  781 YNTIGIPVAA GILYVFGGPL LNPMIAAAAM SLSSVSVVSN ALRLKNFKAY KRD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle