YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DCAKD_DANRE
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVGLTGGI ASGKSTVSSQ LKELGCPVID ADVVARKVVE PQTAAYRLIV RHFGQEVLSE  60
   61 NGEIDRKKLG QIIFSSPEKR RLLNSITHPE IHKEMLKQIL LYFIKGYRYV ILNVPLLFET 120
  121 RRLTRFLTHT VVVYCDPATQ LSRLMQRDAL SQTEAEQRIS AQMPLKEKRG LANHVIENSG 180
  181 SREDTHRQVL RLHSKLDDCM QFLIIRAVAV AALTGLGGLF IYTVKIITS

Type	Start	End	Confidence
Cytoplasmic	1	201	0.60
Transmembrane Helix	202	224	0.87
Non-Cytoplasmic	225	229	0.58