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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2498507, gi|1...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCYFLRKAI RHWVLPAQVR ILSVTHFFFV NSCFLSFYNP FVTFIESSLQ NFLHIAKVSL  60
   61 FYITQVVANR LHCTQLYQHH VLPQLVMSLH ISKLIEQYCS TKDNDLKYML LRQNFKINDI 120
  121 EDELAPLVNE LLLPVLVEEQ DMEILNLVSF QVLPDLVLSM ISDPAAAQLG WVISLICDPL 180
  181 LNQSMIHANR SFVLIETLRN VLQKIENSPH LDYHQPVNSS LEFISKFIVE MKRHMCDVDA 240
  241 AHVSHSLSES NMLIYIESLN LLLKFSFFSD AASPSVMVTL PFDILNDVFT IAQDYSATNT 300
  301 NESIDRITEK LLLTSTQLTH PVDLENLCPK MKYNTLAAVS RIWYKFGPIV DKLFTNRLLP 360
  361 VLFPPQMGEE CNVEDVLEIV HNFHPYFSIR RLKDNRPLLS DSTISQLREG LFGMLSILND 420
  421 SLTRTQNEND HGSDNLIDSD DGFGSDNDPE QQAYLDELVS EGYDENMYDG DTDDEDADDI 480
  481 NVEKNDEATK DITETNKILL IFSELHYPQE ERFSELLVEL QTKIAINTSL IDKILSKETT 540
  541 ELPTHNGEIA DLNEILNEVK GNKPIRKNVI FVSYAILSLQ SGSELSVLQL SIEVIDHLLV 600
  601 KNHSNNITRG EQFQLIKLIL PHLKTNKSFI DTLKAGNFTQ KIDARSDLKN NDSFSTTTTI 660
  661 PTGLLMLGEI LPLLRDICKG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle