YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SGT1_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAGPVA AASRLFRSFS DALIEQDPQA ALEELTKALE QKPDDAPYYC QRAYCHILLG  60
   61 NYSDAVADAK KSLELNPNSS TALLRKGICE YHEKNYAAAL ETFTEGQKLN SADADLTAWI 120
  121 KRCQEAQNGS QPEVSASQRT HQSKIKYDWY QTESQVIITL MIKNVQKNDV NVEFSEKELS 180
  181 ALVKLPSGDD YSLKLRLLHP IIPEQSTFKV LSTKIEIKMK KPEAVRWEKL EGQGDVPNPK 240
  241 PFIADVKNLY PSSSHYTRNW DKLVGEIKEE EKNEKLEGDA ALNKLFQQIY SDGSDEVKRA 300
  301 MNKSFMESGG TVLSTNWSDV GKRKVEINPP DDMEWKKY

Type	Start	End	Confidence
Signal Peptide	1	20	0.56
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	338	0.99