YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86438436, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVPGSYQAA AGPSAVPTAP PSYEETVAVN SYYPTPPAPT PGPNTGLMTG PDGKGMNPPA  60
   61 YYTQPVPVPN ANAIAVQTVY VQQPISFYDR PVQMCCPSCN KMIVTQLSYN AGALTWLSCG 120
  121 SLCLLGCIAG CCFIPFCVDA LQDVDHHCPN CKALLGTYKR L

Type	Start	End	Confidence
Cytoplasmic	1	112	0.63
Transmembrane Helix	113	137	0.66
Non-Cytoplasmic	138	161	0.88