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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89077587
Protein type: Globular with Signal Peptide
Type Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVLVSSAS ATLTKSKSIK IPFLSPNSAK FPSRVSISPQ RPKLLDSPLR VAAPPSVPTS  60
   61 DPAEESRIEE EHGGDKEEEG SEFKWRDHWY PVSLVEDLDP NSPTRFQLLG RDLVLWFDRN 120
  121 DQKWAAFDDL CPHRLAPLSE GRLDENGHLQ CSYHGWSFAG CGSCTRIPQA ATSGPEARAV 180
  181 KSPRACAIKF PTMVSQGLLF VWPDENGWDR ANSIEPPRLP DDFDKPEFST VTIQRDLFYG 240
  241 YDTLMENVSD PSHIDFAHHK VTGRRDRAKP LPFKVESSGP WGFQGANDDG PKITAKFVAP 300
  301 CYSLNKIEID AKLPIVGNQK WVIWICSFNI PMAPGKTRSI VCSARNFFQF SVPGPAWWQV 360
  361 VPRWYEHWTS NLVYDGDMIV LQGQEKVFLS KSMESPDYDV NKQYTKLTFT PTQADRFVLA 420
  421 FRNWLRRYGK SQPEWFGSTA ANQPLPSTVL TKREMLDRFE QHTQVCSSCK GAYNGFQIVK 480
  481 KFLVGTTVLL AATAGVPSDV QIRLVLAGLA LISAASAYAL HEKEKNFVFR DYVHSEIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle