YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPF_LIRTU
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNVTDSFVS LGYWPSAGSF GFNTDILATN LINLSVVLGV LIFFGKGVLS DLLDNRKQRI  60
   61 LSTIRNSEEL REGAIEQLEK ARARLRKVEM EADEFRVNGY SEIEREKQNL INATYENLER 120
  121 LENYKNETIH FEEQRAINQV RQRVFQQALQ GALGTLNSCS NSELHLRTIS ANIGVLGAMK 180
  181 EITD

Type	Start	End	Confidence
Non-Cytoplasmic	1	25	0.75
Transmembrane Helix	26	49	0.76
Cytoplasmic	50	184	0.73