YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YPR098C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLVKTTAHL LFYSFVFGGT TFYSYVASPI AFKVLEKDQF SALQNKIFPY FFQMQAASPV  60
   61 ILALTAPIAL TTGPLSSLVV ASVSGLTNLF WLLPWTHKVK EQRKNIAKKY TGSELEAKDA 120
  121 ILRKEFGKSH GLSLLFNLSN VCGMLAYGVC LSGGLLRKIP K

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.55
Transmembrane Helix	8	32	0.75
Cytoplasmic	33	46	0.62
Transmembrane Helix	47	70	0.67
Non-Cytoplasmic	71	74	0.52
Transmembrane Helix	75	95	0.81
Cytoplasmic	96	132	0.79
Transmembrane Helix	133	156	0.77
Non-Cytoplasmic	157	161	0.68