YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OST2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAPKANTP KVTSTSSAVL TDFQETFKTS KRAYFAQIEK YPKLKLIDTF CFFLVLLGVI  60
   61 QCTFIILIRD NFPFNAFLAG FIICVGQFVL LMSLRLQLCN SFPGISKNRA FAEFIVASLI 120
  121 LHFVCLHFIN

Type	Start	End	Confidence
Cytoplasmic	1	45	0.99
Transmembrane Helix	46	68	0.91
Non-Cytoplasmic	69	75	0.83
Transmembrane Helix	76	96	0.93
Cytoplasmic	97	109	0.83
Transmembrane Helix	110	129	0.90
Non-Cytoplasmic	130	130	0.96