YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPI15
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISKEYEFGK TSILNRKKYT LVIDEDKNGN FIRFTVLPVS NRKFKKVKQN GRVEINMGIQ  60
   61 YHQIVLILLL NILFYVICLR SRFLEHINRT FEVTIARSFQ ILIIMGLFAL GTIILVRGPS 120
  121 VETVTIFKES GLQLSRVKGM VIFPQQWNRK FFEQVEFISN ERIIDVVINE GFCRGFRVIF 180
  181 YLAAIVRKSS TLKLLFPSNL PSIDDQRLIY NISRKYLSKQ EKPLSRPKD

Type	Start	End	Confidence
Non-Cytoplasmic	1	58	0.79
Transmembrane Helix	59	79	0.89
Cytoplasmic	80	97	0.65
Transmembrane Helix	98	116	0.94
Non-Cytoplasmic	117	229	0.77