YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIR014W
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHLEDDNGR QRSVIANLQK FVYCCLYLRF IKDGSLFLIL LGWIISSLCD FIQELTLRYL  60
   61 KKNYLEVGRD NDQEDDESLA IRGLETPIVR MIINKAIRYY QGLILLETAY CIVYHIRLDV 120
  121 SRDICSKPYG FVIMLLIREF TCPVPTAFPS KLLLVLLDIL LLFCQIVIIN GSLSSSLQNV 180
  181 KLIVKELNAE EEGALNILKL NTWHMDATGP ELIVLKNHDK SIPQQADGDD ATEITPLLNI 240
  241 AE

Type	Start	End	Confidence
Cytoplasmic	1	151	0.47
Transmembrane Helix	152	169	0.69
Non-Cytoplasmic	170	242	0.66