YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDL144C
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRILVIGAG GVGVITALSL WLKKESDVSL VVRSDYDRVL KHGYTIESCD YGRLEGWRPH  60
   61 HIYSSVEDAA SAADNQGYNY IVVTTKNIID GPVNSRVSNI IRPVLEKNKE LHGPQLTTHI 120
  121 LLVQNGIDIE KEIWAEFPRE QYRYTVLSGI QLIGSTKIGS GHISQVGQDH LSCGAFDPQD 180
  181 AAAIQAANDF VRMYSNEGQN FVEFDPRVRY SRWKKLLYNA AINTSTALVG LDVPRCLEFG 240
  241 VNKKSTEIEV FHPAMREIIA IAASEGIIIE EEFITMFTEI TRKKVFKPSM CVDCEKGQLM 300
  301 ELEVILGNPI RIAKRNGVAT PTLSILYNLL VLVQAKLKER KGLLKFDEKT ATLVDE

Type	Start	End	Confidence
Signal Peptide	1	19	0.84
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	356	0.98