YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89258
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRALLLSTL VAGALSCGLP ANLPQLPRVV GGEDARPNSW PWQVSLQYDS SGQWRHTCGG  60
   61 TLVDQSWVLT AAHCISSSRT YRVVLGRHSL STNEPGSLAV KVSKLVVHQD WNSNQLSNGN 120
  121 DIALLKLASP VSLTDKIQLG CLPAAGTILP NNYVCYVTGW GRLQTNGASP DILQQGQLLV 180
  181 VDYATCSKPG WWGSTVKTNM ICAGGDGIIS SCNGDSGGPL NCQGANGQWQ VHGIVSFGSS 240
  241 LGCNYYHKPS VFTRVSNYID WINSVIANN

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	269	0.99