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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: contaminant_A465...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLVSSLLL LAALPGLMAA VTLDESGGGL QTPGGALSLV CKASGFTFSS YSMGWMRQAP  60
   61 GKGLEWVAGI DDDGSGTGYG PAVQGRATIS RDNGQSTVRL QLNNLRAEDT ATYYCAKGAS 120
  121 GCGACAGSID AWGHGTEVIV SSASASRPTL YQLLPLPSDC PDPNVTIGCL VTSFLPPPVT 180
  181 VTWTTGGAAD ATAVTSLPVA TTGGTYSLTT ALTVPREQLQ GNEFVCRAQH AATGADVKET 240
  241 IGGDGVCPIF TSKVTLLSDP TQEDFERRVL LVCLVEGLPS AGAAIQWLQD NEEMTPAPES 300
  301 DESGCSDCTE SGVTQWSRVN VTRKSWEGGA QFGCRVTHGA LKEPVTATVS TDCDATPQLQ 360
  361 VSLLPPTLEE LLVSHNATVT CVVSNAAAAD GVSVSWSRSS GGGLDVSQTE DRQADGRYTV 420
  421 RSFLRVCAEE WNGGETFGCS VREEGVVVAE ESIRKETDTP LHAPSVYVFP PPAEELSLQE 480
  481 TATLTCMASS FLPSSILLTW TQQNQPISPQ NYLIFGPEKD GDFYSLYSKL KVSVEDWQRG 540
  541 DVFGCVVGHD GIPLNFIHKS IDKNAGKASH VNVSVVLSDA DVTCY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle