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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110822010, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSFNPTTKT QAAMTAALQS ASSAGNPDIR PAHLLVALLD QTDGIAAPLL KAVGVDPTVV  60
   61 HREGQDLVDR LPKTTGATTT PQLGREALAA LTAAQHLATE LDDEYVSTEH LMVGLASGES 120
  121 DVAGLLKRHG ATPEALRDAF TTVRGSARVT SPDPEGTYQA LEKYSTDLTA LARNGKLDPV 180
  181 IGRDNEIRRV VQVLSRRTKN NPVLIGEPGV GKTAIVEGLA QRIVAGDVPE SLRGKSVISL 240
  241 DLGSMVAGAK YRGEFEERLK AVLDDIKNSA GQVITFIDEL HTIVGAGATG ESAMDAGNMI 300
  301 KPMLARGELR LVGATTLEEY RKYIEKDAAL ERRFQQVLVG EPSVEDTVGI LRGLKERYEV 360
  361 HHGVRITDSA LVAAATLSDR YITSRFLPDK AIDLVDEAAS RLRMEIDSRP EEIDTVERIV 420
  421 RRLEIEEMAL QKESDAASKD RLEKLRQELA DEREKLNQLT TRWQNEKQAI DSVRGVKEQL 480
  481 ETLRGEEERA ERDGDLGRAA ELRYGRIPQL EKELEQAARE SGAAADGDVM LKEEVGPDDV 540
  541 ADVVAAWTGI PAGRMMEGET AKLLRMESEL GKRVVGQEEA VVAVSDAVRR ARAGVADPNR 600
  601 PTGSFLFLGP TGVGKTELAK SLADFLFDDE RAMVRIDMSE YSEKHSVARL VGAPPGYVGY 660
  661 EAGGQLTEAV RRRPYTVVLF DEVEKAHPDV FDILLAVLDE GRLTDGQGRT VDFRNTILIL 720
  721 TSNLGAGGSR EQVMDAVRHA FKPEFINRLD DVVIFESLTE EQLESIVDIQ LDQLSRRLAA 780
  781 RRLTLDVSDS ARFWLAVRGY DPMYGARPLR RLIQQAIGDQ LAKLLLAGDV KDGDTVPVKV 840
  841 SETGDALVLG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle