YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VPRE2_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWTSVLLML LAHLTGCGPQ PMVHQPPSAS SSLGATIRLS CTLSNDHNIG IYSIYWYQQR  60
   61 PGHPPRFLLR YFSHSDKHQG PDIPPRFSGS KDTARNLGYL SISELQPEDE AVYYCAVGLR 120
  121 SHEKKRMERE WEGEKSYTDL GS

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	142	0.99