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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IGA3_HAEIF
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKFKLNF IALTVAYALT PYTEAALVRD DVDYQIFRDF AENKGKFSVG ATNVEVRDKN  60
   61 NRPLGNVLPN GIPMIDFSVV DVDKRIATLV NPQYVVGVKH VSNGVSELHF GNLNGNMNNG 120
  121 NAKAHRDVSS EENRYYTVEK NEYPTKLNGK AVTTEDQAQK RREDYYMPRL DKFVTEVAPI 180
  181 EASTDSSTAG TYNNKDKYPY FVRLGSGTQF IYENGTRYEL WLGKEGQKSD AGGYNLKLVG 240
  241 NAYTYGIAGT PYEVNHENDG LIGFGNSNNE YINPKEILSK KPLTNYAVLG DSGSPLFVYD 300
  301 REKGKWLFLG SYDYWAGYNK KSWQEWNIYK PEFAEKIYEQ YSAGSLIGSK TDYSWSSNGK 360
  361 TSTITGGEKS LNVDLADGKD KPNHGKSVTF EGSGTLTLNN NIDQGAGGLF FEGDYEVKGT 420
  421 SDNTTWKGAG VSVAEGKTVT WKVHNPQYDR LAKIGKGTLI VEGTGDNKGS LKVGDGTVIL 480
  481 KQQTNGSGQH AFASVGIVSG RSTLVLNDDK QVDPNSIYFG FRGGRLDLNG NSLTFDHIRN 540
  541 IDEGARLVNH STSKHSTVTI TGDNLITDPN NVSIYYVKPL EDDNPYAIRQ IKYGYQLYFN 600
  601 EENRTYYALK KDASIRSEFP QNRGESNNSW LYMGTEKADA QKNAMNHINN ERMNGFNGYF 660
  661 GEEEGKNNGN LNVTFKGKSE QNRFLLTGGT NLNGDLNVQQ GTLFLSGRPT PHARDIAGIS 720
  721 STKKDSHFSE NNEVVVEDDW INRNFKATNI NVTNNATLYS GRNVESITSN ITASNNAKVH 780
  781 IGYKAGDTVC VRSDYTGYVT CTTDKLSDKA LNSFNPTNLR GNVNLTESAN FVLGKANLFG 840
  841 TIQSRGNSQV RLTENSHWHL TGNSDVHQLD LANGHIHLNS ADNSNNVTKY NTLTVNSLSG 900
  901 NGSFYYLTDL SNKQGDKVVV TKSATGNFTL QVADKTGEPN HNELTLFDAS KAQRDHLNVS 960
  961 LVGNTVDLGA WKYKLRNVNG RYDLYNPEVE KRNQTVDTTN ITTPNNIQAD VPSVPSNNEE1020
 1021 IARVDEAPVP PPAPATPSET TETVAENSKQ ESKTVEKNEQ DATETTAQNR EVAKEAKSNV1080
 1081 KANTQTNEVA QSGSETKETQ TTETKETATV EKEEKAKVET EKTQEVPKVT SQVSPKQEQS1140
 1141 ETVQPQAEPA RENDPTVNIK EPQSQTNTTA DTEQPAKETS SNVEQPVTES TTVNTGNSVV1200
 1201 ENPENTTPAT TQPTVNSESS NKPKNRHRRS VRSVPHNVEP ATTSSNDRST VALCDLTSTN1260
 1261 TNAVLSDARA KAQFVALNVG KAVSQHISQL EMNNEGQYNV WVSNTSMNKN YSSSQYRRFS1320
 1321 SKSTQTQLGW DQTISNNVQL GGVFTYVRNS NNFDKATSKN TLAQVNFYSK YYADNHWYLG1380
 1381 IDLGYGKFQS KLQTNHNAKF ARHTAQFGLT AGKAFNLGNF GITPIVGVRY SYLSNADFAL1440
 1441 DQARIKVNPI SVKTAFAQVD LSYTYHLGEF SVTPILSARY DANQGSGKIN VNGYDFAYNV1500
 1501 ENQQQYNAGL KLKYHNVKLS LIGGLTKAKQ AEKQKTAELK LSFSF

YRC Informatics Platform - Version 3.0
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