YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IGA2_HAEIF
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKFKLNF IALTVAYALT PYTEAALVRD DVDYQIFRDF AENKGRFSVG ATNVEVRDKN  60
   61 NHSLGNVLPN GIPMIDFSVV DVDKRIATLI NPQYVVGVKH VSNGVSELHF GNLNGNMNNG 120
  121 NDKSHRDVSS EENRYFSVEK NEYPTKLNGK AVTTEDQTQK RREDYYMPRL DKFVTEVAPI 180
  181 EASTASSDAG TYNDQNKYPA FVRLGSGSQF IYKKGDNYSL ILNNHEVGGN NLKLVGDAYT 240
  241 YGIAGTPYKV NHENNGLIGF GNSKEEHSDP KGILSQDPLT NYAVLGDSGS PLFVYDREKG 300
  301 KWLFLGSYDF WAGYNKKSWQ EWNIYKPEFA KTVLDKDTAG SLTGSNTQYN WNPTGKTSVI 360
  361 SNGSESLNVD LFDSSQDTDS KKNNHGKSVT LRGSGTLTLN NNIDQGAGGL FFEGDYEVKG 420
  421 TSDSTTWKGA GVSVADGKTV TWKVHNPKSD RLAKIGKGTL IVEGKGENKG SLKVGDGTVI 480
  481 LKQQADANNK VKAFSQVGIV SGRSTVVLND DKQVDPNSIY FGFRGGRLDA NGNNLTFEHI 540
  541 RNIDDGARLV NHNTSKTSTV TITGESLITD PNTITPYNID APDEDNPYAF RRIKDGGQLY 600
  601 LNLENYTYYA LRKGASTRSE LPKNSGESNE NWLYMGKTSD EAKRNVMNHI NNERMNGFNG 660
  661 YFGEEEGKNN GNLNVTFKGK SEQNRFLLTG GTNLNGDLKV EKGTLFLSGR PTPHARDIAG 720
  721 ISSTKKDQHF AENNEVVVED DWINRNFKAT NINVTNNATL YSGRNVANIT SNITASDNAK 780
  781 VHIGYKAGDT VCVRSDYTGY VTCTTDKLSD KALNSFNATN VSGNVNLSGN ANFVLGKANL 840
  841 FGTISGTGNS QVRLTENSHW HLTGDSNVNQ LNLDKGHIHL NAQNDANKVT TYNTLTVNSL 900
  901 SGNGSFYYLT DLSNKQGDKV VVTKSATGNF TLQVADKTGE PTKNELTLFD ASNATRNNLN 960
  961 VSLVGNTVDL GAWKYKLRNV NGRYDLYNPE VEKRNQTVDT TNITTPNNIQ ADVPSVPSNN1020
 1021 EEIARVETPV PPPAPATPSE TTETVAENSK QESKTVEKNE QDATETTAQN GEVAEEAKPS1080
 1081 VKANTQTNEV AQSGSETEET QTTEIKETAK VEKEEKAKVE KEEKAKVEKD EIQEAPQMAS1140
 1141 ETSPKQAKPA PKEVSTDTKV EETQVQAQPQ TQSTTVAAAE ATSPNSKPAE ETQPSEKTNA1200
 1201 EPVTPVVSKN QTENTTDQPT EREKTAKVET EKTQEPPQVA SQASPKQEQS ETVQPQAVLE1260
 1261 SENVPTVNNA EEVQAQLQTQ TSATVSTKQP APENSINTGS ATAITETAEK SDKPQTETAA1320
 1321 STEDASQHKA NTVADNSVAN NSESSEPKSR RRRSISQPQE TSAEETTAAS TDETTIADNS1380
 1381 KRSKPNRRSR RSVRSEPTVT NGSDRSTVAL RDLTSTNTNA VISDAMAKAQ FVALNVGKAV1440
 1441 SQHISQLEMN NEGQYNVWVS NTSMNENYSS SQYRRFSSKS TQTQLGWDQT ISNNVQLGGV1500
 1501 FTYVRNSNNF DKASSKNTLA QVNFYSKYYA DNHWYLGIDL GYGKFQSNLK TNHNAKFARH1560
 1561 TAQFGLTAGK AFNLGNFGIT PIVGVRYSYL SNANFALAKD RIKVNPISVK TAFAQVDLSY1620
 1621 TYHLGEFSVT PILSARYDTN QGSGKINVNQ YDFAYNVENQ QQYNAGLKLK YHNVKLSLIG1680
 1681 GLTKAKQAEK QKTAELKLSF SF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle