YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IGA1_HAEIF
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKFKLNF IALTVAYALT PYTEAALVRD DVDYQIFRDF AENKGKFSVG ATNVLVKDKN  60
   61 NKDLGTALPN GIPMIDFSVV DVDKRIATLI NPQYVVGVKH VSNGVSELHF GNLNGNMNNG 120
  121 NAKAHRDVSS EENRYFSVEK NEYPTKLNGK TVTTEDQTQK RREDYYMPRL DKFVTEVAPI 180
  181 EASTASSDAG TYNDQNKYPA FVRLGSGSQF IYKKGDNYSL ILNNHEVGGN NLKLVGDAYT 240
  241 YGIAGTPYKV NHENNGLIGF GNSKEEHSDP KGILSQDPLT NYAVLGDSGS PLFVYDREKG 300
  301 KWLFLGSYDF WAGYNKKSWQ EWNIYKSQFT KDVLNKDSAG SLIGSKTDYS WSSNGKTSTI 360
  361 TGGEKSLNVD LADGKDKPNH GKSVTFEGSG TLTLNNNIDQ GAGGLFFEGD YEVKGTSDNT 420
  421 TWKGAGVSVA EGKTVTWKVH NPQYDRLAKI GKGTLIVEGT GDNKGSLKVG DGTVILKQQT 480
  481 NGSGQHAFAS VGIVSGRSTL VLNDDKQVDP NSIYFGFRGG RLDLNGNSLT FDHIRNIDDG 540
  541 ARLVNHNMTN ASNITITGES LITDPNTITP YNIDAPDEDN PYAFRRIKDG GQLYLNLENY 600
  601 TYYALRKGAS TRSELPKNSG ESNENWLYMG KTSDEAKRNV MNHINNERMN GFNGYFGEEE 660
  661 GKNNGNLNVT FKGKSEQNRF LLTGGTNLNG DLTVEKGTLF LSGRPTPHAR DIAGISSTKK 720
  721 DPHFAENNEV VVEDDWINRN FKATTMNVTG NASLYSGRNV ANITSNITAS NKAQVHIGYK 780
  781 TGDTVCVRSD YTGYVTCTTD KLSDKALNSF NPTNLRGNVN LTESANFVLG KANLFGTIQS 840
  841 RGNSQVRLTE NSHWHLTGNS DVHQLDLANG HIHLNSADNS NNVTKYNTLT VNSLSGNGSF 900
  901 YYLTDLSNKQ GDKVVVTKSA TGNFTLQVAD KTGEPNHNEL TLFDASKAQR DHLNVSLVGN 960
  961 TVDLGAWKYK LRNVNGRYDL YNPEVEKRNQ TVDTTNITTP NNIQADVPSV PSNNEEIARV1020
 1021 DEAPVPPPAP ATPSETTETV AENSKQESKT VEKNEQDATE TTAQNREVAK EAKSNVKANT1080
 1081 QTNEVAQSGS ETKETQTTET KETATVEKEE KAKVETEKTQ EVPKVTSQVS PKQEQSETVQ1140
 1141 PQAEPAREND PTVNIKEPQS QTNTTADTEQ PAKETSSNVE QPVTESTTVN TGNSVVENPE1200
 1201 NTTPATTQPT VNSESSNKPK NRHRRSVRSV PHNVEPATTS SNDRSTVALC DLTSTNTNAV1260
 1261 LSDARAKAQF VALNVGKAVS QHISQLEMNN EGQYNVWVSN TSMNKNYSSS QYRRFSSKST1320
 1321 QTQLGWDQTI SNNVQLGGVF TYVRNSNNFD KATSKNTLAQ VNFYSKYYAD NHWYLGIDLG1380
 1381 YGKFQSKLQT NHNAKFARHT AQFGLTAGKA FNLGNFGITP IVGVRYSYLS NADFALDQAR1440
 1441 IKVNPISVKT AFAQVDLSYT YHLGEFSVTP ILSARYDANQ GSGKINVNGY DFAYNVENQQ1500
 1501 QYNAGLKLKY HNVKLSLIGG LTKAKQAEKQ KTAELKLSFS F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle