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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: contaminant_GR78...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAACSRRGNS LVVLAIVLLG CLSALSNAKE EATKLGTVIG IDLGTTYSCV GVYKNGHVEI  60
   61 IANDQGNRIT PSWVAFTDNE RLIGEAAKNL AAVNPERTIF DVKRLIGRKF EDKEVQRDMK 120
  121 LVPYKIVSKD GKPYIQVKIK DGEVKVFSPE EISAMILTKM KETAEAFLGK TIKDAVVTVP 180
  181 AYFNDAQRQA TKDAGVIAGL NVARIINEPT AAAIAYGLDK KGGEKNILVF DLGGGTFDVS 240
  241 ILTIDNGVFE VLATNGDTHL GGEDFDQRIM EYFIKLIKKK HGKDISKDNR ALGKLRREAE 300
  301 RAKRSLSSQH QVRVEIESLF DGTDFSEPLT RARFEELNND LFRKTMGPVK KAMDDAGLQK 360
  361 NQIDEIVLVG GSTRIPKVQQ LLKDYFDGKE PSKGVNPDEA VAYGAAVQGG ILSGEGGDET 420
  421 KDILLLDVAP LTLGIETVGG VMTKFIPRNT VIPTKKSQVF TTYQDQQTTV SIQVFEGERS 480
  481 LTKDCRNLGK FDLTGIPPAP RGTPQIEVTF EVDANGILNV KAEDKGTGKA EKITITNDKG 540
  541 RLSQEEIERM VREAEEFAEE DKKVKEKIDA RNALETYVYN MKNQINDKDK LADKLESDEK 600
  601 EKIETATKEA LEWLDDNQSA EKEDYDEKLK EVEAVCNPII TAVYQRSGGA PGGGASEEED 660
  661 DSHDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle