YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FCERB_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTENRSRAD LALPNPQESS SAPDIELLEA SPAKAAPPKQ TWRTFLKKEL EFLGATQILV  60
   61 GLICLCFGTI VCSVLYVSDF DEEVLLLYKL GYPFWGAVLF VLSGFLSIIS ERKNTLYLVR 120
  121 GSLGANIVSS IAAGTGIAML ILNLTNNFAY MNNCKNVTED DGCFVASFTT ELVLMMLFLT 180
  181 ILAFCSAVLF TIYRIGQELE SKKVPDDRLY EELNVYSPIY SELEDKGETS SPVDS

Type	Start	End	Confidence
Cytoplasmic	1	52	0.99
Transmembrane Helix	53	77	0.89
Non-Cytoplasmic	78	89	0.85
Transmembrane Helix	90	109	0.93
Cytoplasmic	110	120	0.79
Transmembrane Helix	121	142	0.92
Non-Cytoplasmic	143	171	0.96
Transmembrane Helix	172	193	0.93
Cytoplasmic	194	235	0.98