YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FCERA_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTGGSARLC LALVLISLGV MLTATQKSVV SLDPPWIRIL TGDKVTLICN GNNSSQMNST  60
   61 KWIHNDSISN VKSSHWVIVS ATIQDSGKYI CQKQGFYKSK PVYLNVMQEW LLLQSSADVV 120
  121 LDNGSFDIRC RSWKKWKVHK VIYYKDDIAF KYSYDSNNIS IRKATFNDSG SYHCTGYLNK 180
  181 VECKSDKFSI AVVKDYTIEY RWLQLIFPSL AVILFAVDTG LWFSTHKQFE SILKIQKTGK 240
  241 GKKKG

Type	Start	End	Confidence
Signal Peptide	1	25	0.95
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	245	0.90