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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: contaminant_KERA...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASTSTTIRSH SSSRRGFSAS SARLPGVSRS GFSSISVSRS RGSGGLGGAC GGAGFGSRSL  60
   61 YGLGGSKRIS IGGGSCAISG GYGSRAGAGY GFGGAGSGFG FGGGAGIGFG LGGGPALLCF 120
  121 GGPGFPVCPP GGIQEVTVNQ SLLTPLNLQI DPAIQRIGAE EREQIKTLNN KFASFIDKVR 180
  181 FLEQQNKVLD TKWTLLQEQG TKTVRQNLEP LFEQYINNLR RQLDSIVGER GRLDSELRNM 240
  241 QDLVEDLKNK YEVEINKRTA AENEFVTLKK DVDAAYMNKV ELQAKADTLT DEINFLRALY 300
  301 DAELSQMQTH ISDTSVVLSM DNNRNLDLDS IIAEVKAQYE EIAQRSRAEA ESWYQTKYEE 360
  361 LQVTAGRHGD DLRNTKQEIA EINRMIQRLR SEIDHVKKQC ANLQAAIADA EQRGEMALKD 420
  421 AKNKLEGLED ALQKAKQDLA RLLKEYQELM NVKLALDVEI ATYRKLLEGE ECRLNGEGVG 480
  481 QVNISVVQST VSSGYGGASG VGSGLGLGGG SSYSYGSGLG VGGGFSSSSG RATGGGLSSV 540
  541 GGGSSTIKYT TTSSSSRKSY KH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle